| 1. |
- Gowda, Vasantha, 1986-, et al.
(author)
-
Bi(III) Complexes Containing Dithiocarbamate Ligands: Synthesis, Structure Elucidation by X‐ray Diffraction, Solid‐State 13C/15N NMR, and DFT Calculations
- 2020
-
In: ChemistrySelect. - : John Wiley & Sons. - 2365-6549. ; 5:29, s. 8882-8891
-
Journal article (peer-reviewed)abstract
- We report on syntheses, characterisation by nuclear magnetic resonance (NMR) spectroscopy, X‐ray diffraction (XRD) measurements, and density functional theory (DFT) calculations of electronic/molecular structure and NMR chemical shifts of complexes of Bi(III), having the molecular formulae: [Bi{S2CN(C2H5)2)}3] (1), [Bi{S2CN(C2H5)2)}2(C12H8N2)NO3)] (2), and [Bi2{S2CN(CH2)5}6 H2O] (3). The powder XRD patterns of complexes (1) and (2) resembled the corresponding calculated powder XRD patterns for previously reported single crystal structures. Single crystal XRD structure of complex (3), reported in this work, adopted an orthorhombic system with a space group Pbca with a=10.9956(3) Å, b=27.7733(8) Å, c=35.1229(10) Å and α=β=γ=90°. The experimental solid‐state 13C/15N NMR data of the complexes (1)‐(3) were in accord with their X‐ray single crystal structures. The unit cell of the complex (3) shows a weak supramolecular Bi S interaction leading to the formation of a non‐centrosymmetric binuclear molecule [Bi2{S2CN(CH2)5}6 H2O], which displays structural inequivalence in both 13C/15N NMR, and XRD data. Assignments of resonance lines in solid‐state 13C/15N NMR spectra of complexes (1)‐(3) were assisted by chemical shift calculations using periodic DFT methods. The findings of the present multidisciplinary approach will contribute in designing molecular models and further understanding of the structures and properties of (diamagnetic) metal complexes, including heavy metal ones.
|
|
| 2. |
- Gowda, Vasantha, et al.
(author)
-
DFT calculations in the assignment of solid-state NMR and crystal structure elucidation of a lanthanum(iii) complex with dithiocarbamate and phenanthroline
- 2016
-
In: Dalton Transactions. - : Royal Society of Chemistry (RSC). - 1477-9226 .- 1477-9234. ; 45:48, s. 19473-19484
-
Journal article (peer-reviewed)abstract
- The molecular, crystal, and electronic structures as well as spectroscopic properties of a mononuclear heteroleptic lanthanum(iii) complex with diethyldithiocarbamate and 1,10-phenanthroline ligands (3 : 1) were studied by solid-state 13C and 15N cross-polarisation (CP) magic-angle-spinning (MAS) NMR, X-ray diffraction (XRD), and first principles density functional theory (DFT) calculations. A substantially different powder XRD pattern and 13C and 15N CP-MAS NMR spectra indicated that the title compound is not isostructural to the previously reported analogous rare earth complexes with the space group P21/n. Both 13C and 15N CP-MAS NMR revealed the presence of six structurally different dithiocarbamate groups in the asymmetric unit cell, implying a non-centrosymmetric packing arrangement of molecules. This was supported by single-crystal X-ray crystallography showing that the title compound crystallised in the triclinic space group P1[combining macron]. In addition, the crystal structure also revealed that one of the dithiocarbamate ligands has a conformational disorder. NMR chemical shift calculations employing the periodic gauge including projector augmented wave (GIPAW) approach supported the assignment of the experimental 13C and 15N NMR spectra. However, the best correspondences were obtained with the structure where the atomic positions in the X-ray unit cell were optimised at the DFT level. The roles of the scalar and spin-orbit relativistic effects on NMR shielding were investigated using the zeroth-order regular approximation (ZORA) method with the outcome that already the scalar relativistic level qualitatively reproduces the experimental chemical shifts. The electronic properties of the complex were evaluated based on the results of the natural bond orbital (NBO) and topology of the electron density analyses. Overall, we apply a multidisciplinary approach acquiring comprehensive information about the solid-state structure and the metal-ligand bonding of the heteroleptic lanthanum complex.
|
|
| 3. |
- Gowda, Vasantha, et al.
(author)
-
Modelling and structrual optimizations of rare earth coordination : First principles calculations
- 2013
-
Conference paper (other academic/artistic)abstract
- An approximate 3D structure for the yttrium diethyldithiocarbamato-phenanthroline complex 1, obtained by manually replacing the Nd3+ ion with Y3+ion of the reported crystal structure for neodymium diethyldithiocarbamato-phenanthroline complex 2 followed by DFT geometry optimization using periodic boundary conditions with dispersion corrected functional, has been compared with DFT optimized structure for 1. The quality of the method is discussed by comparing predicted PXRD pattern, high resolution solid state 13C and 15N CP/MAS NMR data and calculated chemical shift tensor eigenvalues for optimized structures for 1 and 2. We have observed an excellent agreement between the ‘modeled’ and experimental structures. Finally, to take into account the relativistic effects on NMR shielding calculations, we have employed the zeroth-order regular approximation (ZORA) formalism using Slater-type orbital (STO) basis sets implemented in Amsterdam Density Functional (ADF) package. The present approach can be further extended to study other complexes of rare earth metals in general, particularly those having similar crystal structure.
|
|
| 4. |
- Gowda, Vasantha, et al.
(author)
-
Structural insights into the polymorphism of bismuth(III) di-n-butyldithiocarbamate by X-ray diffraction, solid-state (13C/15N) CP-MAS NMR and DFT calculations
- 2017
-
In: Polyhedron. - : Elsevier. - 0277-5387 .- 1873-3719. ; 129, s. 123-132
-
Journal article (peer-reviewed)abstract
- Two crystalline polymorphs of a binuclear tris(di-n-butyldithiocarbamato)bismuth(III) complex, I and II, with an empirical formula of [Bi{S2CN(n-C4H9)2}3] were synthesised and characterised by X-ray diffraction (XRD), solid-state NMR and density functional theory (DFT) calculations. At the supramolecular level, these mononuclear molecular units interact in pairs via secondary Bi⋯S bonds, yielding binuclear formations of [Bi2{S2CN(n-C4H9)2}6]. The polymorph I () contains two isomeric non-centrosymmetric binuclear molecules of [Bi2{S2CN(n-C4H9)2}6], which are related to each other as conformers, therefore having four structurally inequivalent bismuth atoms and twelve inequivalent dithiocarbamate ligands. In contrast, the structurally simpler polymorph II (P21/n) exists as a single molecular form of the corresponding centrosymmetric binuclear formation, comprising two structurally equivalent bismuth atoms and three structurally different dithiocarbamate groups. The polymorphs I and II were found to be interconvertible by altering the solvent system during the recrystallisation process. Sun et al. (2012) has reported a crystalline form of the title compound which resembles, but is not identical with, polymorph II. Experimental solid-state 13C and 15N cross-polarisation (CP) magic-angle-spinning (MAS) NMR spectra of both polymorphs I and II were in accord with the direct structural data on these complexes. Assignments of the resonance lines in the solid-state 13C and 15N NMR spectra were assisted by chemical shift calculations of the crystals using periodic DFT.
|
|
| 5. |
- Gowda, Vasantha, et al.
(author)
-
Structure Elucidation of an Yttrium Diethyldithiocarbamato-Phenanthroline Complex by X-ray Crystallography, Solid-State NMR, and ab-initio Quantum Chemical Calculations
- 2016
-
In: European Journal of Inorganic Chemistry. - : Wiley. - 1434-1948 .- 1099-1948 .- 1099-0682. ; 20, s. 3278-3291
-
Journal article (peer-reviewed)abstract
- We present a structural analysis method for molecular and electronic structure of yttrium diethyldithiocarbamato-phenanthroline complex {[Y(S2CNR2)3PHEN] with R = C2H5 and PHEN = 1,10-phenanthroline} combining solid-state NMR spectroscopy, XRD, and first principles DFT calculations. Replacing the Nd3+ ion with Y3+ in the reported crystal structure of [Nd(S2CNR2)3PHEN] complex generated an approximate 3D structure of the title complex. The structure was then subjected to first principles quantum chemical geometry optimisation using periodic DFT method. The quality of the method is discussed by comparing predicted and experimental powder XRD patterns. Full assignment of 13C and 15N solid-state CP-MAS NMR spectra as well as analyses of the principal values of the chemical shift tensors were carried out using periodic scalar relativistic DFT modelling. Spin-orbit relativistic effects, estimated by SO-ZORA formalism for one molecular unit, were evaluated. Finally, the X-ray structure of the title complex was determined, which proved that the former procedure is appropriate. The most important orbital interactions were investigated by Natural Bond Orbital analysis. The isotropic shielding values for S2CN-carbons were analysed by Natural Localised Molecular Orbital analysis. The present approach can be further extended to study other rare earth metal complexes, particularly those having similar but not yet solved crystal structures
|
|
| 6. |
- Roukala, Juho, et al.
(author)
-
Experimental and First-Principles NMR Analysis of Pt(II) Complexes With O,O'-Dialkyldithiophosphate Ligands
- 2016
-
In: Journal of Physical Chemistry A. - : American Chemical Society (ACS). - 1089-5639 .- 1520-5215. ; 120:42, s. 8326-8338
-
Journal article (peer-reviewed)abstract
- Polycrystalline bis(dialkyldithiophosphato)Pt(II) complexes of the form [Pt{S2P(OR)2}2] (R = ethyl, iso-propyl, iso-butyl, sec-butyl or cyclo-hexyl group) were studied using solid-state 31P and 195Pt NMR spectroscopy, to determine the influence of R to the structure of the central chromophore. The measured anisotropic chemical shift (CS) parameters for 31P and 195Pt afford more detailed chemical and structural information, as compared to isotropic CS and J couplings alone. Advanced theoretical modeling at the hybrid DFT level, including both crystal lattice and the important relativistic spin-orbit effects qualitatively reproduced the measured CS tensors, supported the experimental analysis, and provided extensive orientational information. A particular correction model for the non-negligible lattice effects was adopted, allowing one to avoid a severe deterioration of the 195Pt anisotropic parameters due to the high requirements posed on the pseudopotential quality in such calculations. Though negligible differences were found between the 195Pt CS tensors with different substituents R, the 31P CS parameters differed significantly between the complexes, implying the potential to distinguish between them. The presented approach enables good resolution and a detailed analysis of heavy-element compounds by solid-state NMR, thus widening the understanding of such systems.
|
|
